Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd1Q6PIP5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nudcd1Q6PIP5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nudcd1Q6PIP5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nudcd1Q6PIP5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nudcd1Q6PIP5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd1Q6PIP5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Trmt13-210ENSMUST00000198454 880 ntBASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd1Q6PIP5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd1Q6PIP5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Gm13168-201ENSMUST00000121771 632 ntBASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd1Q6PIP5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Gm44549-201ENSMUST00000208351 577 ntBASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nudcd1Q6PIP5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd1Q6PIP5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nudcd1Q6PIP5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Nudcd1Q6PIP5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nudcd1Q6PIP5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms