Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rad54bQ6PFE3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rad54bQ6PFE3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rad54bQ6PFE3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rad54bQ6PFE3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rad54bQ6PFE3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Gm43017-201ENSMUST00000198296 752 ntBASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Gm45417-201ENSMUST00000209533 758 ntBASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Rad54bQ6PFE3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rad54bQ6PFE3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rad54bQ6PFE3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rad54bQ6PFE3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms