Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Gm30025-201ENSMUST00000218555 728 ntBASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp40Q6PE01 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Gm21814-202ENSMUST00000203277 873 ntBASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snrnp40Q6PE01 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Zfp783-201ENSMUST00000095946 670 ntBASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snrnp40Q6PE01 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.33■□□□□ 0.21
Snrnp40Q6PE01 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snrnp40Q6PE01 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Gm10138-203ENSMUST00000206952 366 ntBASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snrnp40Q6PE01 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snrnp40Q6PE01 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snrnp40Q6PE01 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms