Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Gm13534-201ENSMUST00000121169 513 ntBASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcc2Q6PDG5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.61■■□□□ 1.05
Smarcc2Q6PDG5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcc2Q6PDG5 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcc2Q6PDG5 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcc2Q6PDG5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcc2Q6PDG5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.58■■□□□ 1.04
Smarcc2Q6PDG5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Smarcc2Q6PDG5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcc2Q6PDG5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcc2Q6PDG5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcc2Q6PDG5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcc2Q6PDG5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Gm6420-201ENSMUST00000193885 723 ntBASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms