Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Gm27275-201ENSMUST00000184318 272 ntBASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Gm8520-201ENSMUST00000186517 868 ntBASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm3aQ6PCM1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Kdm3aQ6PCM1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm3aQ6PCM1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.39■■□□□ 1.17
Kdm3aQ6PCM1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm3aQ6PCM1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 BC021767-201ENSMUST00000126387 1716 ntBASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Kdm3aQ6PCM1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Kdm3aQ6PCM1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Kdm3aQ6PCM1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Notumos-201ENSMUST00000151998 2659 ntBASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.35■■□□□ 1.17
Kdm3aQ6PCM1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Flg-201ENSMUST00000050758 1488 ntBASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Kdm3aQ6PCM1 Gm13168-201ENSMUST00000121771 632 ntBASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Kdm3aQ6PCM1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Kdm3aQ6PCM1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms