Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retreg2Q6NS82 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Gm12933-201ENSMUST00000120203 872 ntBASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retreg2Q6NS82 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retreg2Q6NS82 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retreg2Q6NS82 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Nespas-201ENSMUST00000143738 1083 ntBASIC19.86■□□□□ 0.77
Retreg2Q6NS82 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Gm6420-201ENSMUST00000193885 723 ntBASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retreg2Q6NS82 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Mir5133-201ENSMUST00000174955 77 ntBASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retreg2Q6NS82 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.84■□□□□ 0.77
Retreg2Q6NS82 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retreg2Q6NS82 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retreg2Q6NS82 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms