Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm4Q6IRU2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm4Q6IRU2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm4Q6IRU2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm4Q6IRU2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm4Q6IRU2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Smad6-203ENSMUST00000179458 273 ntBASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm4Q6IRU2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tpm4Q6IRU2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm4Q6IRU2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm4Q6IRU2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Tpm4Q6IRU2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms