Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sema3bQ62177 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.58■□□□□ 0.4
Sema3bQ62177 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.58■□□□□ 0.4
Sema3bQ62177 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sema3bQ62177 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3bQ62177 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sema3bQ62177 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sema3bQ62177 Gm7860-201ENSMUST00000121190 879 ntBASIC17.57■□□□□ 0.4
Sema3bQ62177 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sema3bQ62177 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3bQ62177 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.57■□□□□ 0.4
Sema3bQ62177 Dio3-201ENSMUST00000097228 1449 ntBASIC17.56■□□□□ 0.4
Sema3bQ62177 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Sema3bQ62177 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sema3bQ62177 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sema3bQ62177 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3bQ62177 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3bQ62177 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3bQ62177 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3bQ62177 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sema3bQ62177 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3bQ62177 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sema3bQ62177 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sema3bQ62177 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3bQ62177 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.54■□□□□ 0.4
Sema3bQ62177 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sema3bQ62177 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Gm11643-201ENSMUST00000119578 864 ntBASIC17.54■□□□□ 0.4
Sema3bQ62177 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.54■□□□□ 0.4
Sema3bQ62177 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3bQ62177 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sema3bQ62177 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sema3bQ62177 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.53■□□□□ 0.4
Sema3bQ62177 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.53■□□□□ 0.4
Sema3bQ62177 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
Sema3bQ62177 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sema3bQ62177 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Gm15565-201ENSMUST00000118890 427 ntBASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.52■□□□□ 0.4
Sema3bQ62177 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sema3bQ62177 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.52■□□□□ 0.39
Sema3bQ62177 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms