Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rai1Q61818 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rai1Q61818 Gm21814-202ENSMUST00000203277 873 ntBASIC18.01■□□□□ 0.47
Rai1Q61818 Gm18025-201ENSMUST00000221733 862 ntBASIC18.01■□□□□ 0.47
Rai1Q61818 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rai1Q61818 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rai1Q61818 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rai1Q61818 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Golph3-202ENSMUST00000226517 2359 ntBASIC18■□□□□ 0.47
Rai1Q61818 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Gm6433-201ENSMUST00000118634 875 ntBASIC18■□□□□ 0.47
Rai1Q61818 Gm12382-201ENSMUST00000122005 922 ntBASIC18■□□□□ 0.47
Rai1Q61818 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rai1Q61818 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18■□□□□ 0.47
Rai1Q61818 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18■□□□□ 0.47
Rai1Q61818 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rai1Q61818 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.99■□□□□ 0.47
Rai1Q61818 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.99■□□□□ 0.47
Rai1Q61818 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rai1Q61818 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rai1Q61818 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rai1Q61818 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rai1Q61818 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rai1Q61818 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.99■□□□□ 0.47
Rai1Q61818 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rai1Q61818 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Gm3375-201ENSMUST00000203929 796 ntBASIC17.98■□□□□ 0.47
Rai1Q61818 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.98■□□□□ 0.47
Rai1Q61818 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.98■□□□□ 0.47
Rai1Q61818 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rai1Q61818 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.97■□□□□ 0.47
Rai1Q61818 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rai1Q61818 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.97■□□□□ 0.47
Rai1Q61818 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.96■□□□□ 0.47
Rai1Q61818 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rai1Q61818 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rai1Q61818 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Rai1Q61818 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Rai1Q61818 Gm15375-201ENSMUST00000119510 849 ntBASIC17.95■□□□□ 0.46
Rai1Q61818 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rai1Q61818 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rai1Q61818 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rai1Q61818 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rai1Q61818 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rai1Q61818 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Rai1Q61818 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Rai1Q61818 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rai1Q61818 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.94■□□□□ 0.46
Rai1Q61818 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rai1Q61818 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.94■□□□□ 0.46
Rai1Q61818 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rai1Q61818 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rai1Q61818 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms