Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Foxc1Q61572 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Foxc1Q61572 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxc1Q61572 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxc1Q61572 Gm13146-201ENSMUST00000118508 780 ntBASIC13.52□□□□□ -0.25
Foxc1Q61572 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.52□□□□□ -0.25
Foxc1Q61572 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Foxc1Q61572 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Foxc1Q61572 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Foxc1Q61572 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Foxc1Q61572 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxc1Q61572 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.51□□□□□ -0.25
Foxc1Q61572 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Foxc1Q61572 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.51□□□□□ -0.25
Foxc1Q61572 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Foxc1Q61572 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxc1Q61572 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Foxc1Q61572 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Foxc1Q61572 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Foxc1Q61572 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Foxc1Q61572 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.5□□□□□ -0.25
Foxc1Q61572 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Gm27011-201ENSMUST00000182352 972 ntBASIC13.5□□□□□ -0.25
Foxc1Q61572 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.5□□□□□ -0.25
Foxc1Q61572 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Foxc1Q61572 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxc1Q61572 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.49□□□□□ -0.25
Foxc1Q61572 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Foxc1Q61572 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Gm7514-201ENSMUST00000209475 934 ntBASIC13.49□□□□□ -0.25
Foxc1Q61572 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Foxc1Q61572 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxc1Q61572 Rarb-207ENSMUST00000225921 2756 ntBASIC13.49□□□□□ -0.25
Foxc1Q61572 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Foxc1Q61572 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms