Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox17Q61473 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.37■□□□□ 0.37
Sox17Q61473 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sox17Q61473 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sox17Q61473 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Sox17Q61473 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox17Q61473 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sox17Q61473 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Sox17Q61473 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox17Q61473 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox17Q61473 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox17Q61473 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sox17Q61473 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
Sox17Q61473 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.36■□□□□ 0.37
Sox17Q61473 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.36■□□□□ 0.37
Sox17Q61473 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sox17Q61473 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox17Q61473 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sox17Q61473 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sox17Q61473 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox17Q61473 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sox17Q61473 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox17Q61473 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox17Q61473 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sox17Q61473 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Sox17Q61473 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox17Q61473 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.33■□□□□ 0.36
Sox17Q61473 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Sox17Q61473 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox17Q61473 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox17Q61473 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sox17Q61473 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.32■□□□□ 0.36
Sox17Q61473 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox17Q61473 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sox17Q61473 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox17Q61473 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox17Q61473 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox17Q61473 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms