Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd1Q61466 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.33■□□□□ 0.68
Smarcd1Q61466 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd1Q61466 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd1Q61466 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarcd1Q61466 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Gm27011-201ENSMUST00000182352 972 ntBASIC19.32■□□□□ 0.68
Smarcd1Q61466 Gm20049-201ENSMUST00000219950 730 ntBASIC19.32■□□□□ 0.68
Smarcd1Q61466 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd1Q61466 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Gm12527-201ENSMUST00000117967 564 ntBASIC19.31■□□□□ 0.68
Smarcd1Q61466 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcd1Q61466 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcd1Q61466 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcd1Q61466 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.3■□□□□ 0.68
Smarcd1Q61466 Gm44549-201ENSMUST00000208351 577 ntBASIC19.3■□□□□ 0.68
Smarcd1Q61466 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcd1Q61466 BC021767-201ENSMUST00000126387 1716 ntBASIC19.3■□□□□ 0.68
Smarcd1Q61466 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd1Q61466 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd1Q61466 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.28■□□□□ 0.68
Smarcd1Q61466 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd1Q61466 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd1Q61466 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.27■□□□□ 0.68
Smarcd1Q61466 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd1Q61466 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.27■□□□□ 0.68
Smarcd1Q61466 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd1Q61466 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.27■□□□□ 0.68
Smarcd1Q61466 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd1Q61466 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcd1Q61466 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Smarcd1Q61466 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.27■□□□□ 0.67
Smarcd1Q61466 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcd1Q61466 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd1Q61466 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms