Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a1Q61245 AA414768-201ENSMUST00000121924 1257 ntBASIC21.03■□□□□ 0.96
Col11a1Q61245 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.03■□□□□ 0.96
Col11a1Q61245 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a1Q61245 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a1Q61245 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a1Q61245 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
Col11a1Q61245 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col11a1Q61245 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Col11a1Q61245 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col11a1Q61245 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col11a1Q61245 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a1Q61245 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a1Q61245 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a1Q61245 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col11a1Q61245 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col11a1Q61245 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col11a1Q61245 Gm38285-201ENSMUST00000192928 922 ntBASIC20.99■□□□□ 0.95
Col11a1Q61245 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a1Q61245 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.99■□□□□ 0.95
Col11a1Q61245 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.99■□□□□ 0.95
Col11a1Q61245 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.99■□□□□ 0.95
Col11a1Q61245 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Col11a1Q61245 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a1Q61245 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col11a1Q61245 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.99■□□□□ 0.95
Col11a1Q61245 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.99■□□□□ 0.95
Col11a1Q61245 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a1Q61245 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a1Q61245 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a1Q61245 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.98■□□□□ 0.95
Col11a1Q61245 Mir6349-201ENSMUST00000184059 97 ntBASIC20.98■□□□□ 0.95
Col11a1Q61245 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.98■□□□□ 0.95
Col11a1Q61245 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a1Q61245 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.98■□□□□ 0.95
Col11a1Q61245 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col11a1Q61245 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a1Q61245 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a1Q61245 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a1Q61245 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col11a1Q61245 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a1Q61245 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.97■□□□□ 0.95
Col11a1Q61245 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col11a1Q61245 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col11a1Q61245 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Ank2-226ENSMUST00000189368 339 ntBASIC20.96■□□□□ 0.95
Col11a1Q61245 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col11a1Q61245 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col11a1Q61245 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Col11a1Q61245 Gm17971-201ENSMUST00000190239 806 ntBASIC20.95■□□□□ 0.94
Col11a1Q61245 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col11a1Q61245 Gm9103-201ENSMUST00000119371 405 ntBASIC20.94■□□□□ 0.94
Col11a1Q61245 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.94■□□□□ 0.94
Col11a1Q61245 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.94■□□□□ 0.94
Col11a1Q61245 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Col11a1Q61245 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.94■□□□□ 0.94
Col11a1Q61245 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.94■□□□□ 0.94
Col11a1Q61245 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col11a1Q61245 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col11a1Q61245 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms