Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hcfc1Q61191 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.68■□□□□ 0.1
Hcfc1Q61191 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcfc1Q61191 Gm7367-201ENSMUST00000057611 492 ntBASIC15.68■□□□□ 0.1
Hcfc1Q61191 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.68■□□□□ 0.1
Hcfc1Q61191 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcfc1Q61191 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcfc1Q61191 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.67■□□□□ 0.1
Hcfc1Q61191 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hcfc1Q61191 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.66■□□□□ 0.1
Hcfc1Q61191 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcfc1Q61191 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Odf3b-204ENSMUST00000227834 930 ntBASIC15.65■□□□□ 0.1
Hcfc1Q61191 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hcfc1Q61191 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hcfc1Q61191 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.64■□□□□ 0.09
Hcfc1Q61191 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Mir6349-201ENSMUST00000184059 97 ntBASIC15.63■□□□□ 0.09
Hcfc1Q61191 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hcfc1Q61191 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hcfc1Q61191 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hcfc1Q61191 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Hcfc1Q61191 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms