Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sim2Q61079 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sim2Q61079 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sim2Q61079 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sim2Q61079 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sim2Q61079 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.1■□□□□ 0.49
Sim2Q61079 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.1■□□□□ 0.49
Sim2Q61079 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sim2Q61079 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.1■□□□□ 0.49
Sim2Q61079 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.1■□□□□ 0.49
Sim2Q61079 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.09■□□□□ 0.49
Sim2Q61079 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Gm13559-201ENSMUST00000120476 863 ntBASIC18.09■□□□□ 0.49
Sim2Q61079 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Sim2Q61079 Gm27741-201ENSMUST00000185060 237 ntBASIC18.09■□□□□ 0.49
Sim2Q61079 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.09■□□□□ 0.49
Sim2Q61079 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sim2Q61079 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sim2Q61079 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.08■□□□□ 0.49
Sim2Q61079 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.08■□□□□ 0.49
Sim2Q61079 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sim2Q61079 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.08■□□□□ 0.48
Sim2Q61079 Gm11539-201ENSMUST00000119837 557 ntBASIC18.08■□□□□ 0.48
Sim2Q61079 Gm13436-201ENSMUST00000120418 567 ntBASIC18.08■□□□□ 0.48
Sim2Q61079 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.08■□□□□ 0.48
Sim2Q61079 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Sim2Q61079 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sim2Q61079 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
Sim2Q61079 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sim2Q61079 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sim2Q61079 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sim2Q61079 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.07■□□□□ 0.48
Sim2Q61079 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sim2Q61079 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Sim2Q61079 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sim2Q61079 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sim2Q61079 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sim2Q61079 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Gm7889-201ENSMUST00000185591 958 ntBASIC18.06■□□□□ 0.48
Sim2Q61079 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sim2Q61079 Mtag2-201ENSMUST00000058665 714 ntBASIC18.06■□□□□ 0.48
Sim2Q61079 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sim2Q61079 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Sim2Q61079 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sim2Q61079 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sim2Q61079 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.05■□□□□ 0.48
Sim2Q61079 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.05■□□□□ 0.48
Sim2Q61079 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim2Q61079 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.05■□□□□ 0.48
Sim2Q61079 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms