Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.38■□□□□ 0.37
Tnfaip3Q60769 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfaip3Q60769 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Rab3c-203ENSMUST00000224180 967 ntBASIC17.37■□□□□ 0.37
Tnfaip3Q60769 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfaip3Q60769 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.36■□□□□ 0.37
Tnfaip3Q60769 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfaip3Q60769 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfaip3Q60769 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.34■□□□□ 0.37
Tnfaip3Q60769 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfaip3Q60769 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfaip3Q60769 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tnfaip3Q60769 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Golph3-205ENSMUST00000228671 2842 ntBASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfaip3Q60769 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms