Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf4Q60722 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf4Q60722 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tcf4Q60722 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf4Q60722 Gm10033-202ENSMUST00000211874 928 ntBASIC19.3■□□□□ 0.68
Tcf4Q60722 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcf4Q60722 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tcf4Q60722 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tcf4Q60722 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.29■□□□□ 0.68
Tcf4Q60722 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcf4Q60722 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.28■□□□□ 0.68
Tcf4Q60722 Gm42778-201ENSMUST00000199644 553 ntBASIC19.28■□□□□ 0.68
Tcf4Q60722 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.28■□□□□ 0.68
Tcf4Q60722 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tcf4Q60722 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tcf4Q60722 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Tcf4Q60722 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.27■□□□□ 0.68
Tcf4Q60722 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.27■□□□□ 0.68
Tcf4Q60722 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.27■□□□□ 0.68
Tcf4Q60722 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Tcf4Q60722 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tcf4Q60722 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tcf4Q60722 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tcf4Q60722 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Tcf4Q60722 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.27■□□□□ 0.67
Tcf4Q60722 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tcf4Q60722 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tcf4Q60722 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Tcf4Q60722 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.25■□□□□ 0.67
Tcf4Q60722 Gm5874-201ENSMUST00000096101 508 ntBASIC19.25■□□□□ 0.67
Tcf4Q60722 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tcf4Q60722 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.24■□□□□ 0.67
Tcf4Q60722 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tcf4Q60722 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tcf4Q60722 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Tcf4Q60722 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.24■□□□□ 0.67
Tcf4Q60722 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tcf4Q60722 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Tcf4Q60722 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tcf4Q60722 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms