Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6-2Q5R1I4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trav6-2Q5R1I4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Gm10698-201ENSMUST00000182663 604 ntBASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-2Q5R1I4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-2Q5R1I4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav6-2Q5R1I4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav6-2Q5R1I4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Gm715-201ENSMUST00000117865 831 ntBASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Gm11927-201ENSMUST00000118472 759 ntBASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-2Q5R1I4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-2Q5R1I4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms