Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7d-4Q5R1H9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7d-4Q5R1H9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-4Q5R1H9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Gm45444-201ENSMUST00000211394 898 ntBASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.13□□□□□ -0.15
Trav7d-4Q5R1H9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.12□□□□□ -0.15
Trav7d-4Q5R1H9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-4Q5R1H9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms