Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm15820-201ENSMUST00000201566 728 ntBASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Gm22238-201ENSMUST00000175222 88 ntBASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav15-1-dv6-1Q5R1D2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15-1-dv6-1Q5R1D2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms