Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Gm7889-201ENSMUST00000185591 958 ntBASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Gm42545-201ENSMUST00000202755 922 ntBASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-2Q5R1B6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-2Q5R1B6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.12■□□□□ 0.49
Trav8d-2Q5R1B6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Gm3375-201ENSMUST00000203929 796 ntBASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-2Q5R1B6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-2Q5R1B6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Gm37292-201ENSMUST00000192062 758 ntBASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-2Q5R1B6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8d-2Q5R1B6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8d-2Q5R1B6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8d-2Q5R1B6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav8d-2Q5R1B6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.08■□□□□ 0.48
Trav8d-2Q5R1B6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms