Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trpm3Q5F4S9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Flg-201ENSMUST00000050758 1488 ntBASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trpm3Q5F4S9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Trpm3Q5F4S9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trpm3Q5F4S9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trpm3Q5F4S9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trpm3Q5F4S9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trpm3Q5F4S9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trpm3Q5F4S9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trpm3Q5F4S9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trpm3Q5F4S9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trpm3Q5F4S9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Trpm3Q5F4S9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trpm3Q5F4S9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Mir1199-201ENSMUST00000117015 119 ntBASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trpm3Q5F4S9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trpm3Q5F4S9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Gm38285-201ENSMUST00000192928 922 ntBASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.67■■□□□ 1.38
Trpm3Q5F4S9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Mir5122-201ENSMUST00000175004 89 ntBASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trpm3Q5F4S9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trpm3Q5F4S9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Trpm3Q5F4S9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trpm3Q5F4S9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.64■■□□□ 1.37
Trpm3Q5F4S9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.64■■□□□ 1.37
Trpm3Q5F4S9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.63■■□□□ 1.37
Trpm3Q5F4S9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trpm3Q5F4S9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Trpm3Q5F4S9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Trpm3Q5F4S9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Trpm3Q5F4S9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.62■■□□□ 1.37
Trpm3Q5F4S9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms