Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf20Q5DTM8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Gm5874-201ENSMUST00000096101 508 ntBASIC22.08■■□□□ 1.13
Rnf20Q5DTM8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf20Q5DTM8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Gm18671-201ENSMUST00000214826 683 ntBASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf20Q5DTM8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf20Q5DTM8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Gm42642-201ENSMUST00000200683 355 ntBASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Gm10033-202ENSMUST00000211874 928 ntBASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf20Q5DTM8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf20Q5DTM8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf20Q5DTM8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rnf20Q5DTM8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Rnf20Q5DTM8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.11
Rnf20Q5DTM8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf20Q5DTM8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms