Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn2bQ56A07 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn2bQ56A07 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn2bQ56A07 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn2bQ56A07 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn2bQ56A07 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn2bQ56A07 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn2bQ56A07 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.33■□□□□ 0.53
Scn2bQ56A07 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn2bQ56A07 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn2bQ56A07 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn2bQ56A07 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.32■□□□□ 0.52
Scn2bQ56A07 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.32■□□□□ 0.52
Scn2bQ56A07 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn2bQ56A07 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Gm27801-201ENSMUST00000184174 223 ntBASIC18.31■□□□□ 0.52
Scn2bQ56A07 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn2bQ56A07 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.3■□□□□ 0.52
Scn2bQ56A07 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn2bQ56A07 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms