Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pls1Q3V0K9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pls1Q3V0K9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pls1Q3V0K9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.29■■□□□ 1
Pls1Q3V0K9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.29■■□□□ 1
Pls1Q3V0K9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pls1Q3V0K9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pls1Q3V0K9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pls1Q3V0K9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.28■■□□□ 1
Pls1Q3V0K9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pls1Q3V0K9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pls1Q3V0K9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pls1Q3V0K9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pls1Q3V0K9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.27■■□□□ 1
Pls1Q3V0K9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.27■■□□□ 1
Pls1Q3V0K9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.27■■□□□ 1
Pls1Q3V0K9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pls1Q3V0K9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.27■■□□□ 1
Pls1Q3V0K9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pls1Q3V0K9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pls1Q3V0K9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pls1Q3V0K9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pls1Q3V0K9 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.27■□□□□ 0.99
Pls1Q3V0K9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pls1Q3V0K9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pls1Q3V0K9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Gm2399-201ENSMUST00000104944 225 ntBASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pls1Q3V0K9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pls1Q3V0K9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pls1Q3V0K9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pls1Q3V0K9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pls1Q3V0K9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pls1Q3V0K9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pls1Q3V0K9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pls1Q3V0K9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms