Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cnga4Q3UW12 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cnga4Q3UW12 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cnga4Q3UW12 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cnga4Q3UW12 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cnga4Q3UW12 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cnga4Q3UW12 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cnga4Q3UW12 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cnga4Q3UW12 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cnga4Q3UW12 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cnga4Q3UW12 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cnga4Q3UW12 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.76■□□□□ 0.59
Cnga4Q3UW12 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cnga4Q3UW12 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms