Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rapgef1Q3UHC1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Gm12933-201ENSMUST00000120203 872 ntBASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Rapgef1Q3UHC1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.21■□□□□ 0.83
Rapgef1Q3UHC1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Rapgef1Q3UHC1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rapgef1Q3UHC1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.19■□□□□ 0.82
Rapgef1Q3UHC1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rapgef1Q3UHC1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.17■□□□□ 0.82
Rapgef1Q3UHC1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms