Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Gm44549-201ENSMUST00000208351 577 ntBASIC20.68■□□□□ 0.9
Palb2Q3U0P1 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Palb2Q3U0P1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Mir1199-201ENSMUST00000117015 119 ntBASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Palb2Q3U0P1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Gm2399-201ENSMUST00000104944 225 ntBASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.66■□□□□ 0.9
Palb2Q3U0P1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Palb2Q3U0P1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.65■□□□□ 0.9
Palb2Q3U0P1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Palb2Q3U0P1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Palb2Q3U0P1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Palb2Q3U0P1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Palb2Q3U0P1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Palb2Q3U0P1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Palb2Q3U0P1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.63■□□□□ 0.89
Palb2Q3U0P1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Palb2Q3U0P1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Palb2Q3U0P1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.61■□□□□ 0.89
Palb2Q3U0P1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.61■□□□□ 0.89
Palb2Q3U0P1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Palb2Q3U0P1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms