Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.05□□□□□ -0.8
Ush2AQ2QI47 Gm11950-201ENSMUST00000121615 838 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm27463-201ENSMUST00000183569 57 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm9013-201ENSMUST00000132939 882 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm2651-201ENSMUST00000203560 838 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Gm17808-201ENSMUST00000200859 894 ntBASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ush2AQ2QI47 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 AC153962.1-201ENSMUST00000218530 1948 ntBASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ush2AQ2QI47 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.8
Ush2AQ2QI47 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Gm10418-201ENSMUST00000100943 576 ntBASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ush2AQ2QI47 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Gm12085-201ENSMUST00000119263 940 ntBASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 AA386476-201ENSMUST00000098781 1665 ntBASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ush2AQ2QI47 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ush2AQ2QI47 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms