Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Gm12527-201ENSMUST00000117967 564 ntBASIC17.44■□□□□ 0.38
Nkx3-2P97503 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Nkx3-2P97503 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.43■□□□□ 0.38
Nkx3-2P97503 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-2P97503 Rarb-207ENSMUST00000225921 2756 ntBASIC17.43■□□□□ 0.38
Nkx3-2P97503 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-2P97503 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Gm20049-201ENSMUST00000219950 730 ntBASIC17.41■□□□□ 0.38
Nkx3-2P97503 Rab3c-203ENSMUST00000224180 967 ntBASIC17.41■□□□□ 0.38
Nkx3-2P97503 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-2P97503 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.4■□□□□ 0.38
Nkx3-2P97503 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.4■□□□□ 0.38
Nkx3-2P97503 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.4■□□□□ 0.38
Nkx3-2P97503 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-2P97503 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx3-2P97503 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.39■□□□□ 0.37
Nkx3-2P97503 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Gm10653-202ENSMUST00000139570 835 ntBASIC17.39■□□□□ 0.37
Nkx3-2P97503 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nkx3-2P97503 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-2P97503 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-2P97503 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms