Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Atf1P81269 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf1P81269 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.04■□□□□ 0.16
Atf1P81269 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Atf1P81269 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Atf1P81269 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Atf1P81269 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atf1P81269 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.04■□□□□ 0.16
Atf1P81269 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atf1P81269 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atf1P81269 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.03■□□□□ 0.16
Atf1P81269 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.03■□□□□ 0.16
Atf1P81269 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.03■□□□□ 0.16
Atf1P81269 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.03■□□□□ 0.16
Atf1P81269 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.03■□□□□ 0.16
Atf1P81269 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Atf1P81269 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atf1P81269 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Atf1P81269 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atf1P81269 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.02■□□□□ 0.16
Atf1P81269 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.02■□□□□ 0.16
Atf1P81269 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.02■□□□□ 0.16
Atf1P81269 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.02■□□□□ 0.16
Atf1P81269 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atf1P81269 Gm9988-201ENSMUST00000069786 435 ntBASIC16.02■□□□□ 0.16
Atf1P81269 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.02■□□□□ 0.15
Atf1P81269 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.02■□□□□ 0.15
Atf1P81269 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf1P81269 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf1P81269 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf1P81269 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atf1P81269 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.02■□□□□ 0.15
Atf1P81269 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Atf1P81269 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Atf1P81269 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Atf1P81269 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf1P81269 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16■□□□□ 0.15
Atf1P81269 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 CT010467.1-202ENSMUST00000205406 714 ntBASIC16■□□□□ 0.15
Atf1P81269 Gm19094-201ENSMUST00000209791 1246 ntBASIC16■□□□□ 0.15
Atf1P81269 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Atf1P81269 Gm45906-201ENSMUST00000208911 1430 ntBASIC16■□□□□ 0.15
Atf1P81269 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Atf1P81269 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Atf1P81269 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16■□□□□ 0.15
Atf1P81269 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf1P81269 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Atf1P81269 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf1P81269 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Atf1P81269 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.99■□□□□ 0.15
Atf1P81269 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.99■□□□□ 0.15
Atf1P81269 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.99■□□□□ 0.15
Atf1P81269 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms