Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cux2P70298 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cux2P70298 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cux2P70298 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC30.74■■■□□ 2.51
Cux2P70298 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC30.74■■■□□ 2.51
Cux2P70298 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
Cux2P70298 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC30.73■■■□□ 2.51
Cux2P70298 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Cux2P70298 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC30.73■■■□□ 2.51
Cux2P70298 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cux2P70298 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cux2P70298 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Cux2P70298 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cux2P70298 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cux2P70298 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC30.71■■■□□ 2.51
Cux2P70298 AC130713.1-201ENSMUST00000228853 1096 ntBASIC30.71■■■□□ 2.51
Cux2P70298 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC30.7■■■□□ 2.51
Cux2P70298 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cux2P70298 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Cux2P70298 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Cux2P70298 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC30.7■■■□□ 2.5
Cux2P70298 Gm17661-201ENSMUST00000170317 270 ntBASIC30.7■■■□□ 2.5
Cux2P70298 Mir5130-201ENSMUST00000175160 84 ntBASIC30.7■■■□□ 2.5
Cux2P70298 Gm7461-201ENSMUST00000058918 827 ntBASIC30.7■■■□□ 2.5
Cux2P70298 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Cux2P70298 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Cux2P70298 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cux2P70298 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC30.69■■■□□ 2.5
Cux2P70298 Gm27463-201ENSMUST00000183569 57 ntBASIC30.69■■■□□ 2.5
Cux2P70298 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC30.69■■■□□ 2.5
Cux2P70298 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cux2P70298 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC30.69■■■□□ 2.5
Cux2P70298 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC30.69■■■□□ 2.5
Cux2P70298 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cux2P70298 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cux2P70298 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC30.68■■■□□ 2.5
Cux2P70298 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC30.68■■■□□ 2.5
Cux2P70298 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cux2P70298 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cux2P70298 Gm45640-201ENSMUST00000210665 1896 ntBASIC30.68■■■□□ 2.5
Cux2P70298 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC30.67■■■□□ 2.5
Cux2P70298 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cux2P70298 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC30.67■■■□□ 2.5
Cux2P70298 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Cux2P70298 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cux2P70298 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cux2P70298 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
Cux2P70298 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC30.66■■■□□ 2.5
Cux2P70298 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Cux2P70298 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cux2P70298 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cux2P70298 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Cux2P70298 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cux2P70298 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC30.65■■■□□ 2.5
Cux2P70298 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cux2P70298 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cux2P70298 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC30.65■■■□□ 2.5
Cux2P70298 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC30.65■■■□□ 2.5
Cux2P70298 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC30.64■■■□□ 2.5
Cux2P70298 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
Cux2P70298 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cux2P70298 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC30.64■■■□□ 2.5
Cux2P70298 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cux2P70298 Gm37352-201ENSMUST00000193908 2181 ntBASIC30.64■■■□□ 2.5
Cux2P70298 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Cux2P70298 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC30.64■■■□□ 2.5
Cux2P70298 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC30.64■■■□□ 2.49
Cux2P70298 Gm43353-201ENSMUST00000199224 1295 ntBASIC30.64■■■□□ 2.49
Cux2P70298 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.49
Cux2P70298 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cux2P70298 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cux2P70298 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cux2P70298 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cux2P70298 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cux2P70298 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC30.63■■■□□ 2.49
Cux2P70298 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
Cux2P70298 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Cux2P70298 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cux2P70298 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cux2P70298 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cux2P70298 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC30.62■■■□□ 2.49
Cux2P70298 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms