Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.68■□□□□ 0.58
ThraP63058 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.68■□□□□ 0.58
ThraP63058 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ThraP63058 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ThraP63058 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Mir5133-201ENSMUST00000174955 77 ntBASIC18.67■□□□□ 0.58
ThraP63058 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ThraP63058 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ThraP63058 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
ThraP63058 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.66■□□□□ 0.58
ThraP63058 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.66■□□□□ 0.58
ThraP63058 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.66■□□□□ 0.58
ThraP63058 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ThraP63058 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.66■□□□□ 0.58
ThraP63058 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ThraP63058 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.65■□□□□ 0.58
ThraP63058 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.65■□□□□ 0.58
ThraP63058 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.65■□□□□ 0.58
ThraP63058 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ThraP63058 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.65■□□□□ 0.58
ThraP63058 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ThraP63058 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ThraP63058 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ThraP63058 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.64■□□□□ 0.57
ThraP63058 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ThraP63058 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ThraP63058 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.64■□□□□ 0.57
ThraP63058 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ThraP63058 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
ThraP63058 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Gm38205-201ENSMUST00000192243 258 ntBASIC18.63■□□□□ 0.57
ThraP63058 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.63■□□□□ 0.57
ThraP63058 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ThraP63058 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ThraP63058 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ThraP63058 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ThraP63058 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ThraP63058 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ThraP63058 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms