Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.03■□□□□ 0.64
Ybx1P62960 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.03■□□□□ 0.64
Ybx1P62960 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ybx1P62960 Gm13836-201ENSMUST00000121159 501 ntBASIC19.03■□□□□ 0.64
Ybx1P62960 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.03■□□□□ 0.64
Ybx1P62960 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.03■□□□□ 0.64
Ybx1P62960 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ybx1P62960 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ybx1P62960 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ybx1P62960 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Ybx1P62960 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ybx1P62960 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.02■□□□□ 0.64
Ybx1P62960 Gm15565-201ENSMUST00000118890 427 ntBASIC19.02■□□□□ 0.64
Ybx1P62960 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ybx1P62960 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.02■□□□□ 0.64
Ybx1P62960 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.02■□□□□ 0.64
Ybx1P62960 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.02■□□□□ 0.64
Ybx1P62960 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ybx1P62960 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ybx1P62960 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ybx1P62960 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.01■□□□□ 0.63
Ybx1P62960 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.01■□□□□ 0.63
Ybx1P62960 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ybx1P62960 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ybx1P62960 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ybx1P62960 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ybx1P62960 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Ybx1P62960 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Ybx1P62960 H2-K2-201ENSMUST00000174250 1049 ntBASIC19■□□□□ 0.63
Ybx1P62960 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 Gm29994-201ENSMUST00000195495 1193 ntBASIC19■□□□□ 0.63
Ybx1P62960 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ybx1P62960 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ybx1P62960 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ybx1P62960 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ybx1P62960 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Ybx1P62960 Gm15378-201ENSMUST00000121894 207 ntBASIC18.99■□□□□ 0.63
Ybx1P62960 Gm13158-201ENSMUST00000122007 736 ntBASIC18.99■□□□□ 0.63
Ybx1P62960 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.99■□□□□ 0.63
Ybx1P62960 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.99■□□□□ 0.63
Ybx1P62960 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.99■□□□□ 0.63
Ybx1P62960 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ybx1P62960 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.99■□□□□ 0.63
Ybx1P62960 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ybx1P62960 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ybx1P62960 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ybx1P62960 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.98■□□□□ 0.63
Ybx1P62960 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.98■□□□□ 0.63
Ybx1P62960 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ybx1P62960 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ybx1P62960 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ybx1P62960 Mir1199-201ENSMUST00000117015 119 ntBASIC18.97■□□□□ 0.63
Ybx1P62960 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.97■□□□□ 0.63
Ybx1P62960 Gm37055-201ENSMUST00000191866 133 ntBASIC18.97■□□□□ 0.63
Ybx1P62960 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ybx1P62960 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ybx1P62960 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ybx1P62960 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms