Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.22□□□□□ -0.29
Rpl39P62892 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.22□□□□□ -0.29
Rpl39P62892 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpl39P62892 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.21□□□□□ -0.29
Rpl39P62892 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rpl39P62892 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rpl39P62892 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpl39P62892 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.21□□□□□ -0.3
Rpl39P62892 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpl39P62892 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.2□□□□□ -0.3
Rpl39P62892 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rpl39P62892 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.2□□□□□ -0.3
Rpl39P62892 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Rpl39P62892 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpl39P62892 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rpl39P62892 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rpl39P62892 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl39P62892 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpl39P62892 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rpl39P62892 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.19□□□□□ -0.3
Rpl39P62892 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.19□□□□□ -0.3
Rpl39P62892 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rpl39P62892 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl39P62892 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Rpl39P62892 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rpl39P62892 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rpl39P62892 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpl39P62892 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.18□□□□□ -0.3
Rpl39P62892 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpl39P62892 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.18□□□□□ -0.3
Rpl39P62892 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl39P62892 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms