Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm6P62313 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Lsm6P62313 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.23■□□□□ 0.19
Lsm6P62313 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm6P62313 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm6P62313 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lsm6P62313 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.23■□□□□ 0.19
Lsm6P62313 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lsm6P62313 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Lsm6P62313 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.23■□□□□ 0.19
Lsm6P62313 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.23■□□□□ 0.19
Lsm6P62313 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.23■□□□□ 0.19
Lsm6P62313 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm6P62313 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.23■□□□□ 0.19
Lsm6P62313 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm6P62313 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lsm6P62313 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lsm6P62313 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm6P62313 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.21■□□□□ 0.19
Lsm6P62313 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.21■□□□□ 0.19
Lsm6P62313 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.21■□□□□ 0.19
Lsm6P62313 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm6P62313 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
Lsm6P62313 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm6P62313 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm6P62313 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lsm6P62313 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lsm6P62313 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lsm6P62313 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Gm10033-202ENSMUST00000211874 928 ntBASIC16.2■□□□□ 0.18
Lsm6P62313 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Gm18671-201ENSMUST00000214826 683 ntBASIC16.2■□□□□ 0.18
Lsm6P62313 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lsm6P62313 Gm5874-201ENSMUST00000096101 508 ntBASIC16.2■□□□□ 0.18
Lsm6P62313 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm6P62313 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm6P62313 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lsm6P62313 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lsm6P62313 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Gm42642-201ENSMUST00000200683 355 ntBASIC16.19■□□□□ 0.18
Lsm6P62313 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lsm6P62313 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm6P62313 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm6P62313 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Lsm6P62313 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.18■□□□□ 0.18
Lsm6P62313 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.18■□□□□ 0.18
Lsm6P62313 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.18■□□□□ 0.18
Lsm6P62313 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms