Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm3P62311 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm3P62311 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm3P62311 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.94■□□□□ 0.3
Lsm3P62311 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.94■□□□□ 0.3
Lsm3P62311 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.94■□□□□ 0.3
Lsm3P62311 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.94■□□□□ 0.3
Lsm3P62311 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lsm3P62311 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lsm3P62311 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm3P62311 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lsm3P62311 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm3P62311 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Gm43530-201ENSMUST00000195920 274 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lsm3P62311 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.93■□□□□ 0.3
Lsm3P62311 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm3P62311 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm3P62311 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lsm3P62311 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.92■□□□□ 0.3
Lsm3P62311 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm3P62311 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lsm3P62311 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm3P62311 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm3P62311 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.9■□□□□ 0.3
Lsm3P62311 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.9■□□□□ 0.3
Lsm3P62311 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm3P62311 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.9■□□□□ 0.3
Lsm3P62311 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm3P62311 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm3P62311 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm3P62311 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Lsm3P62311 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lsm3P62311 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lsm3P62311 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.89■□□□□ 0.29
Lsm3P62311 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Lsm3P62311 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lsm3P62311 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm3P62311 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.89■□□□□ 0.29
Lsm3P62311 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm3P62311 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm3P62311 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm3P62311 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms