Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp20P57748 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp20P57748 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.34■■□□□ 1.01
Mmp20P57748 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.34■■□□□ 1.01
Mmp20P57748 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp20P57748 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp20P57748 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp20P57748 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp20P57748 Gm43799-201ENSMUST00000201845 579 ntBASIC21.33■■□□□ 1.01
Mmp20P57748 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp20P57748 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp20P57748 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1
Mmp20P57748 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp20P57748 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp20P57748 Gm6433-201ENSMUST00000118634 875 ntBASIC21.32■■□□□ 1
Mmp20P57748 Gm43183-201ENSMUST00000200632 547 ntBASIC21.32■■□□□ 1
Mmp20P57748 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.32■■□□□ 1
Mmp20P57748 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.32■■□□□ 1
Mmp20P57748 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp20P57748 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Mmp20P57748 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.31■■□□□ 1
Mmp20P57748 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.31■■□□□ 1
Mmp20P57748 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Mmp20P57748 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.31■■□□□ 1
Mmp20P57748 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.31■■□□□ 1
Mmp20P57748 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.31■■□□□ 1
Mmp20P57748 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.31■■□□□ 1
Mmp20P57748 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp20P57748 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.3■■□□□ 1
Mmp20P57748 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp20P57748 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.29■■□□□ 1
Mmp20P57748 Gm10138-203ENSMUST00000206952 366 ntBASIC21.29■■□□□ 1
Mmp20P57748 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp20P57748 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.28■■□□□ 1
Mmp20P57748 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Mmp20P57748 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Mmp20P57748 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.28■■□□□ 1
Mmp20P57748 Gm10231-201ENSMUST00000181584 441 ntBASIC21.28■■□□□ 1
Mmp20P57748 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Gm10175-202ENSMUST00000208752 441 ntBASIC21.28■■□□□ 1
Mmp20P57748 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp20P57748 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Mmp20P57748 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp20P57748 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp20P57748 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Mmp20P57748 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mmp20P57748 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp20P57748 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp20P57748 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Mmp20P57748 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Mmp20P57748 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Mmp20P57748 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp20P57748 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp20P57748 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Mmp20P57748 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp20P57748 Gm21814-202ENSMUST00000203277 873 ntBASIC21.25■□□□□ 0.99
Mmp20P57748 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms