Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NcanP55066 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.71■□□□□ 0.75
NcanP55066 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
NcanP55066 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.7■□□□□ 0.74
NcanP55066 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NcanP55066 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.7■□□□□ 0.74
NcanP55066 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NcanP55066 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NcanP55066 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.69■□□□□ 0.74
NcanP55066 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NcanP55066 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NcanP55066 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.69■□□□□ 0.74
NcanP55066 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NcanP55066 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
NcanP55066 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.68■□□□□ 0.74
NcanP55066 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NcanP55066 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.68■□□□□ 0.74
NcanP55066 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NcanP55066 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NcanP55066 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NcanP55066 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NcanP55066 Gm7153-201ENSMUST00000117092 455 ntBASIC19.67■□□□□ 0.74
NcanP55066 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.67■□□□□ 0.74
NcanP55066 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.67■□□□□ 0.74
NcanP55066 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Gm45058-201ENSMUST00000205810 766 ntBASIC19.67■□□□□ 0.74
NcanP55066 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.67■□□□□ 0.74
NcanP55066 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NcanP55066 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
NcanP55066 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NcanP55066 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.66■□□□□ 0.74
NcanP55066 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.66■□□□□ 0.74
NcanP55066 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NcanP55066 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.66■□□□□ 0.74
NcanP55066 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NcanP55066 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.65■□□□□ 0.74
NcanP55066 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NcanP55066 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.65■□□□□ 0.74
NcanP55066 Gm7063-201ENSMUST00000186840 981 ntBASIC19.65■□□□□ 0.74
NcanP55066 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.65■□□□□ 0.74
NcanP55066 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NcanP55066 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
NcanP55066 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.65■□□□□ 0.74
NcanP55066 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NcanP55066 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
NcanP55066 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.64■□□□□ 0.74
NcanP55066 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NcanP55066 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NcanP55066 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NcanP55066 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NcanP55066 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NcanP55066 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NcanP55066 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NcanP55066 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NcanP55066 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms