Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Mtag2-201ENSMUST00000058665 714 ntBASIC17.95■□□□□ 0.46
Lbx1P52955 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lbx1P52955 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.95■□□□□ 0.46
Lbx1P52955 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lbx1P52955 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.94■□□□□ 0.46
Lbx1P52955 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.94■□□□□ 0.46
Lbx1P52955 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.94■□□□□ 0.46
Lbx1P52955 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.94■□□□□ 0.46
Lbx1P52955 Gm28659-201ENSMUST00000188013 759 ntBASIC17.94■□□□□ 0.46
Lbx1P52955 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.94■□□□□ 0.46
Lbx1P52955 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.94■□□□□ 0.46
Lbx1P52955 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Lbx1P52955 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lbx1P52955 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lbx1P52955 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Lbx1P52955 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.93■□□□□ 0.46
Lbx1P52955 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm18025-201ENSMUST00000221733 862 ntBASIC17.93■□□□□ 0.46
Lbx1P52955 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.93■□□□□ 0.46
Lbx1P52955 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lbx1P52955 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lbx1P52955 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.92■□□□□ 0.46
Lbx1P52955 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lbx1P52955 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.92■□□□□ 0.46
Lbx1P52955 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lbx1P52955 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lbx1P52955 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.92■□□□□ 0.46
Lbx1P52955 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lbx1P52955 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Lbx1P52955 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lbx1P52955 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.91■□□□□ 0.46
Lbx1P52955 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.91■□□□□ 0.46
Lbx1P52955 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.91■□□□□ 0.46
Lbx1P52955 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Lbx1P52955 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lbx1P52955 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lbx1P52955 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lbx1P52955 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lbx1P52955 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.9■□□□□ 0.46
Lbx1P52955 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lbx1P52955 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Lbx1P52955 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Gm27463-201ENSMUST00000183569 57 ntBASIC17.9■□□□□ 0.46
Lbx1P52955 Gm2274-201ENSMUST00000184539 609 ntBASIC17.9■□□□□ 0.46
Lbx1P52955 Gm18115-201ENSMUST00000221209 621 ntBASIC17.9■□□□□ 0.46
Lbx1P52955 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lbx1P52955 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lbx1P52955 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lbx1P52955 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lbx1P52955 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lbx1P52955 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lbx1P52955 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lbx1P52955 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lbx1P52955 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
Lbx1P52955 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lbx1P52955 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.89■□□□□ 0.45
Lbx1P52955 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lbx1P52955 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Lbx1P52955 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms