Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1P51675 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccr1P51675 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1P51675 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Ccr1P51675 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccr1P51675 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccr1P51675 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccr1P51675 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1P51675 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccr1P51675 Gm10252-201ENSMUST00000209541 832 ntBASIC20.18■□□□□ 0.82
Ccr1P51675 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccr1P51675 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1P51675 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1P51675 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ccr1P51675 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccr1P51675 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ccr1P51675 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccr1P51675 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ccr1P51675 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ccr1P51675 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccr1P51675 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccr1P51675 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.16■□□□□ 0.82
Ccr1P51675 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.16■□□□□ 0.82
Ccr1P51675 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccr1P51675 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccr1P51675 Gm22325-201ENSMUST00000158904 308 ntBASIC20.15■□□□□ 0.82
Ccr1P51675 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccr1P51675 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.14■□□□□ 0.81
Ccr1P51675 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccr1P51675 Gm18666-201ENSMUST00000190039 958 ntBASIC20.14■□□□□ 0.81
Ccr1P51675 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Ccr1P51675 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccr1P51675 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.14■□□□□ 0.81
Ccr1P51675 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccr1P51675 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1P51675 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1P51675 Flg-201ENSMUST00000050758 1488 ntBASIC20.13■□□□□ 0.81
Ccr1P51675 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1P51675 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.13■□□□□ 0.81
Ccr1P51675 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1P51675 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1P51675 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccr1P51675 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.12■□□□□ 0.81
Ccr1P51675 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccr1P51675 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1P51675 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.11■□□□□ 0.81
Ccr1P51675 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccr1P51675 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms