Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SftpbP50405 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SftpbP50405 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SftpbP50405 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SftpbP50405 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SftpbP50405 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SftpbP50405 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SftpbP50405 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SftpbP50405 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.96■□□□□ 0.63
SftpbP50405 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SftpbP50405 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SftpbP50405 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.95■□□□□ 0.62
SftpbP50405 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
SftpbP50405 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SftpbP50405 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SftpbP50405 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SftpbP50405 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SftpbP50405 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SftpbP50405 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.94■□□□□ 0.62
SftpbP50405 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SftpbP50405 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SftpbP50405 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SftpbP50405 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SftpbP50405 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.93■□□□□ 0.62
SftpbP50405 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SftpbP50405 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Gm45417-201ENSMUST00000209533 758 ntBASIC18.93■□□□□ 0.62
SftpbP50405 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Gm6139-201ENSMUST00000079261 882 ntBASIC18.93■□□□□ 0.62
SftpbP50405 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.93■□□□□ 0.62
SftpbP50405 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SftpbP50405 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SftpbP50405 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SftpbP50405 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.92■□□□□ 0.62
SftpbP50405 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SftpbP50405 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.92■□□□□ 0.62
SftpbP50405 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.91■□□□□ 0.62
SftpbP50405 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.91■□□□□ 0.62
SftpbP50405 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SftpbP50405 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.91■□□□□ 0.62
SftpbP50405 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SftpbP50405 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.91■□□□□ 0.62
SftpbP50405 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SftpbP50405 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SftpbP50405 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SftpbP50405 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Gm26833-201ENSMUST00000180899 440 ntBASIC18.9■□□□□ 0.62
SftpbP50405 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SftpbP50405 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms