Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sdc2P43407 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Grk6-206ENSMUST00000224995 2971 ntBASIC20.78■□□□□ 0.92
Sdc2P43407 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.78■□□□□ 0.92
Sdc2P43407 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sdc2P43407 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Sdc2P43407 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.78■□□□□ 0.92
Sdc2P43407 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sdc2P43407 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Sdc2P43407 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sdc2P43407 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sdc2P43407 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.77■□□□□ 0.92
Sdc2P43407 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sdc2P43407 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sdc2P43407 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sdc2P43407 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.76■□□□□ 0.91
Sdc2P43407 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.76■□□□□ 0.91
Sdc2P43407 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sdc2P43407 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Sdc2P43407 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sdc2P43407 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.75■□□□□ 0.91
Sdc2P43407 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.75■□□□□ 0.91
Sdc2P43407 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sdc2P43407 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.75■□□□□ 0.91
Sdc2P43407 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.75■□□□□ 0.91
Sdc2P43407 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Sdc2P43407 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sdc2P43407 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.74■□□□□ 0.91
Sdc2P43407 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdc2P43407 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.73■□□□□ 0.91
Sdc2P43407 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.73■□□□□ 0.91
Sdc2P43407 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.73■□□□□ 0.91
Sdc2P43407 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdc2P43407 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.72■□□□□ 0.91
Sdc2P43407 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Sdc2P43407 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.72■□□□□ 0.91
Sdc2P43407 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sdc2P43407 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sdc2P43407 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sdc2P43407 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms