Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdx2P43241 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Cdx2P43241 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdx2P43241 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdx2P43241 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdx2P43241 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdx2P43241 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdx2P43241 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Cdx2P43241 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdx2P43241 Gm10231-201ENSMUST00000181584 441 ntBASIC17.65■□□□□ 0.42
Cdx2P43241 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdx2P43241 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdx2P43241 Gm10175-202ENSMUST00000208752 441 ntBASIC17.65■□□□□ 0.42
Cdx2P43241 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdx2P43241 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Cdx2P43241 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdx2P43241 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Cdx2P43241 Gm43183-201ENSMUST00000200632 547 ntBASIC17.64■□□□□ 0.41
Cdx2P43241 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Zfp783-201ENSMUST00000095946 670 ntBASIC17.64■□□□□ 0.41
Cdx2P43241 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdx2P43241 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdx2P43241 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.63■□□□□ 0.41
Cdx2P43241 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdx2P43241 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.63■□□□□ 0.41
Cdx2P43241 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cdx2P43241 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cdx2P43241 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdx2P43241 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdx2P43241 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdx2P43241 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdx2P43241 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cdx2P43241 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cdx2P43241 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.62■□□□□ 0.41
Cdx2P43241 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdx2P43241 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdx2P43241 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.62■□□□□ 0.41
Cdx2P43241 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdx2P43241 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Cdx2P43241 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdx2P43241 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdx2P43241 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdx2P43241 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdx2P43241 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.61■□□□□ 0.41
Cdx2P43241 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms