Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Abca1P41233 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Abca1P41233 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca1P41233 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.33■□□□□ 0.04
Abca1P41233 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.32■□□□□ 0.04
Abca1P41233 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.32■□□□□ 0.04
Abca1P41233 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Gm7860-201ENSMUST00000121190 879 ntBASIC15.32■□□□□ 0.04
Abca1P41233 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Gm37055-201ENSMUST00000191866 133 ntBASIC15.32■□□□□ 0.04
Abca1P41233 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Abca1P41233 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca1P41233 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Abca1P41233 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Abca1P41233 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abca1P41233 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.31■□□□□ 0.04
Abca1P41233 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.31■□□□□ 0.04
Abca1P41233 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Abca1P41233 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Abca1P41233 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Abca1P41233 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca1P41233 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Abca1P41233 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca1P41233 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.29■□□□□ 0.04
Abca1P41233 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Abca1P41233 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.29■□□□□ 0.04
Abca1P41233 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Abca1P41233 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca1P41233 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Abca1P41233 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca1P41233 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
Abca1P41233 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Abca1P41233 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
Abca1P41233 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.28■□□□□ 0.04
Abca1P41233 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Abca1P41233 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Abca1P41233 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.28■□□□□ 0.04
Abca1P41233 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Abca1P41233 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.28■□□□□ 0.04
Abca1P41233 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca1P41233 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Abca1P41233 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.27■□□□□ 0.04
Abca1P41233 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Abca1P41233 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.27■□□□□ 0.04
Abca1P41233 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.27■□□□□ 0.04
Abca1P41233 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca1P41233 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms