Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HmgclP38060 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
HmgclP38060 Gm27405-201ENSMUST00000184201 112 ntBASIC18.27■□□□□ 0.52
HmgclP38060 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.27■□□□□ 0.52
HmgclP38060 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HmgclP38060 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HmgclP38060 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
HmgclP38060 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.26■□□□□ 0.51
HmgclP38060 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.26■□□□□ 0.51
HmgclP38060 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HmgclP38060 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HmgclP38060 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HmgclP38060 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HmgclP38060 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.25■□□□□ 0.51
HmgclP38060 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.25■□□□□ 0.51
HmgclP38060 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.25■□□□□ 0.51
HmgclP38060 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.25■□□□□ 0.51
HmgclP38060 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HmgclP38060 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
HmgclP38060 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HmgclP38060 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.24■□□□□ 0.51
HmgclP38060 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HmgclP38060 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HmgclP38060 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HmgclP38060 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.23■□□□□ 0.51
HmgclP38060 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.23■□□□□ 0.51
HmgclP38060 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HmgclP38060 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.23■□□□□ 0.51
HmgclP38060 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HmgclP38060 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HmgclP38060 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Gm6365-201ENSMUST00000054711 744 ntBASIC18.22■□□□□ 0.51
HmgclP38060 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.22■□□□□ 0.51
HmgclP38060 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HmgclP38060 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HmgclP38060 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HmgclP38060 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HmgclP38060 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.21■□□□□ 0.51
HmgclP38060 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.21■□□□□ 0.51
HmgclP38060 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.21■□□□□ 0.51
HmgclP38060 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HmgclP38060 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.21■□□□□ 0.51
HmgclP38060 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.21■□□□□ 0.51
HmgclP38060 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HmgclP38060 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HmgclP38060 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HmgclP38060 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.21■□□□□ 0.51
HmgclP38060 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HmgclP38060 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Gm7291-201ENSMUST00000199147 382 ntBASIC18.2■□□□□ 0.5
HmgclP38060 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HmgclP38060 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms