Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
LdlrP35951 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LdlrP35951 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.41■□□□□ 0.54
LdlrP35951 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.41■□□□□ 0.54
LdlrP35951 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.41■□□□□ 0.54
LdlrP35951 Smad6-203ENSMUST00000179458 273 ntBASIC18.41■□□□□ 0.54
LdlrP35951 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LdlrP35951 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.41■□□□□ 0.54
LdlrP35951 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LdlrP35951 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.4■□□□□ 0.54
LdlrP35951 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LdlrP35951 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LdlrP35951 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LdlrP35951 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.39■□□□□ 0.54
LdlrP35951 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LdlrP35951 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Gm10033-202ENSMUST00000211874 928 ntBASIC18.39■□□□□ 0.53
LdlrP35951 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LdlrP35951 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.38■□□□□ 0.53
LdlrP35951 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LdlrP35951 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LdlrP35951 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.38■□□□□ 0.53
LdlrP35951 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.38■□□□□ 0.53
LdlrP35951 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LdlrP35951 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LdlrP35951 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LdlrP35951 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LdlrP35951 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.38■□□□□ 0.53
LdlrP35951 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
LdlrP35951 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LdlrP35951 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.37■□□□□ 0.53
LdlrP35951 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LdlrP35951 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LdlrP35951 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LdlrP35951 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LdlrP35951 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LdlrP35951 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
LdlrP35951 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.36■□□□□ 0.53
LdlrP35951 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.36■□□□□ 0.53
LdlrP35951 Gm18671-201ENSMUST00000214826 683 ntBASIC18.36■□□□□ 0.53
LdlrP35951 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LdlrP35951 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LdlrP35951 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LdlrP35951 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.36■□□□□ 0.53
LdlrP35951 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.36■□□□□ 0.53
LdlrP35951 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LdlrP35951 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 AV356131-201ENSMUST00000206201 750 ntBASIC18.35■□□□□ 0.53
LdlrP35951 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LdlrP35951 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LdlrP35951 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.34■□□□□ 0.53
LdlrP35951 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LdlrP35951 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.34■□□□□ 0.53
LdlrP35951 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LdlrP35951 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms