Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nedd8P29595 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nedd8P29595 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nedd8P29595 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Nedd8P29595 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nedd8P29595 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nedd8P29595 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.18■□□□□ 0.34
Nedd8P29595 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nedd8P29595 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.17■□□□□ 0.34
Nedd8P29595 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nedd8P29595 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nedd8P29595 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.16■□□□□ 0.34
Nedd8P29595 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.16■□□□□ 0.34
Nedd8P29595 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.16■□□□□ 0.34
Nedd8P29595 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.16■□□□□ 0.34
Nedd8P29595 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nedd8P29595 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.15■□□□□ 0.34
Nedd8P29595 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.15■□□□□ 0.34
Nedd8P29595 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.15■□□□□ 0.34
Nedd8P29595 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.15■□□□□ 0.34
Nedd8P29595 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Nedd8P29595 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nedd8P29595 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nedd8P29595 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nedd8P29595 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nedd8P29595 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
Nedd8P29595 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nedd8P29595 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.14■□□□□ 0.33
Nedd8P29595 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nedd8P29595 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nedd8P29595 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd8P29595 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd8P29595 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd8P29595 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd8P29595 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nedd8P29595 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms