Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.44■□□□□ 0.54
Nckap1P28660 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nckap1P28660 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nckap1P28660 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
Nckap1P28660 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nckap1P28660 Dio3-201ENSMUST00000097228 1449 ntBASIC18.43■□□□□ 0.54
Nckap1P28660 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.43■□□□□ 0.54
Nckap1P28660 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nckap1P28660 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nckap1P28660 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Nckap1P28660 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nckap1P28660 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nckap1P28660 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.42■□□□□ 0.54
Nckap1P28660 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.42■□□□□ 0.54
Nckap1P28660 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nckap1P28660 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nckap1P28660 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nckap1P28660 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nckap1P28660 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nckap1P28660 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.41■□□□□ 0.54
Nckap1P28660 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nckap1P28660 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.41■□□□□ 0.54
Nckap1P28660 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nckap1P28660 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
Nckap1P28660 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nckap1P28660 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nckap1P28660 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nckap1P28660 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nckap1P28660 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nckap1P28660 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.39■□□□□ 0.54
Nckap1P28660 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nckap1P28660 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Nckap1P28660 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.39■□□□□ 0.53
Nckap1P28660 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nckap1P28660 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nckap1P28660 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nckap1P28660 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.38■□□□□ 0.53
Nckap1P28660 Gm18666-201ENSMUST00000190039 958 ntBASIC18.38■□□□□ 0.53
Nckap1P28660 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nckap1P28660 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nckap1P28660 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.38■□□□□ 0.53
Nckap1P28660 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.37■□□□□ 0.53
Nckap1P28660 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nckap1P28660 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.37■□□□□ 0.53
Nckap1P28660 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nckap1P28660 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nckap1P28660 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms