Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gja8P28236 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gja8P28236 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.63■□□□□ 0.89
Gja8P28236 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.63■□□□□ 0.89
Gja8P28236 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gja8P28236 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gja8P28236 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Gja8P28236 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Gja8P28236 Gm13559-201ENSMUST00000120476 863 ntBASIC20.62■□□□□ 0.89
Gja8P28236 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.62■□□□□ 0.89
Gja8P28236 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gja8P28236 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gja8P28236 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.61■□□□□ 0.89
Gja8P28236 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gja8P28236 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gja8P28236 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.61■□□□□ 0.89
Gja8P28236 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Gja8P28236 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gja8P28236 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gja8P28236 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gja8P28236 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Gja8P28236 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.6■□□□□ 0.89
Gja8P28236 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gja8P28236 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.59■□□□□ 0.89
Gja8P28236 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gja8P28236 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gja8P28236 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gja8P28236 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.59■□□□□ 0.89
Gja8P28236 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gja8P28236 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gja8P28236 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gja8P28236 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gja8P28236 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gja8P28236 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Gja8P28236 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.58■□□□□ 0.89
Gja8P28236 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.58■□□□□ 0.89
Gja8P28236 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gja8P28236 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gja8P28236 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gja8P28236 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.58■□□□□ 0.88
Gja8P28236 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gja8P28236 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Gja8P28236 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.57■□□□□ 0.88
Gja8P28236 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gja8P28236 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gja8P28236 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gja8P28236 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Gja8P28236 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
Gja8P28236 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gja8P28236 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms